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Categories: documentation data analysis

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GitHub

anndata

davila7

This skill should be used when working with annotated data matrices in Python, particularly for single-cell genomics analysis, managing experimental measurements with metadata, or handling large-scale biologica...

☆ 18,948View skill
GitHub

pydeseq2

davila7

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

☆ 18,943View skill
GitHub

senior-data-scientist

davila7

World-class data science skill for statistical modeling, experimentation, causal inference, and advanced analytics. Expertise in Python (NumPy, Pandas, Scikit-learn), R, SQL, statistical methods, A/B testing, t...

☆ 18,943View skill
GitHub

plotly

davila7

Interactive scientific and statistical data visualization library for Python. Use when creating charts, plots, or visualizations including scatter plots, line charts, bar charts, heatmaps, 3D plots, geographic...

☆ 18,942View skill
GitHub

scikit-survival

davila7

Comprehensive toolkit for survival analysis and time-to-event modeling in Python using scikit-survival. Use this skill when working with censored survival data, performing time-to-event analysis, fitting Cox mo...

☆ 18,942View skill
GitHub

geopandas

davila7

Python library for working with geospatial vector data including shapefiles, GeoJSON, and GeoPackage files. Use when working with geographic data for spatial analysis, geometric operations, coordinate transform...

☆ 18,940View skill
GitHub

networkx

davila7

Comprehensive toolkit for creating, analyzing, and visualizing complex networks and graphs in Python. Use when working with network/graph data structures, analyzing relationships between entities, computing gra...

☆ 18,938View skill
GitHub

scikit-survival

K-Dense-AI

Comprehensive toolkit for survival analysis and time-to-event modeling in Python using scikit-survival. Use this skill when working with censored survival data, performing time-to-event analysis, fitting Cox mo...

GitHub

networkx

K-Dense-AI

Comprehensive toolkit for creating, analyzing, and visualizing complex networks and graphs in Python. Use when working with network/graph data structures, analyzing relationships between entities, computing gra...

GitHub

statsmodels

K-Dense-AI

Statistical models library for Python. Use when you need specific model classes (OLS, GLM, mixed models, ARIMA) with detailed diagnostics, residuals, and inference. Best for econometrics, time series, rigorous...

GitHub

matlab

K-Dense-AI

MATLAB and GNU Octave numerical computing for matrix operations, data analysis, visualization, and scientific computing. Use when writing MATLAB/Octave scripts for linear algebra, signal processing, image proce...

GitHub

geopandas

K-Dense-AI

Python library for working with geospatial vector data including shapefiles, GeoJSON, and GeoPackage files. Use when working with geographic data for spatial analysis, geometric operations, coordinate transform...

GitHub

pydeseq2

K-Dense-AI

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

GitHub

chart-visualization

antvis

This skill should be used when the user wants to visualize data. It intelligently selects the most suitable chart type from 26 available options, extracts parameters based on detailed specifications, and genera...

GitHub

scientific-schematics

jimmc414

Create publication-quality scientific diagrams, flowcharts, and schematics using Python (graphviz, matplotlib, schemdraw, networkx). Specialized in neural network architectures, system diagrams, and flowcharts....

GitHub

bio-metagenomics-visualization

GPTomics

Visualize metagenomic profiles using R (phyloseq, microbiome) and Python (matplotlib, seaborn). Create stacked bar plots, heatmaps, PCA plots, and diversity analyses. Use when creating publication-quality figur...

GitHub

pycse

jkitchin

Python computations in science and engineering (pycse) - helps with scientific computing tasks including nonlinear regression, uncertainty quantification, design of experiments (DOE), Latin hypercube sampling,...

GitHub

marimo-development

aiskillstore

Expert guidance for creating and working with marimo notebooks - reactive Python notebooks that can be executed as scripts and deployed as apps. Use when the user asks to create marimo notebooks, convert Jupyte...

GitHub

data-analysis

aiskillstore

A skill for analyzing data using Python (pandas) and generating professional visualizations (matplotlib/seaborn).

GitHub

excel-report-generator

wwwzhouhui

Automatically generate Excel reports from data sources including CSV, databases, or Python data structures. Supports data analysis reports, business reports, data export, and template-based report generation us...

GitHub

python-data-stack

vuralserhat86

Statistical modeling toolkit. OLS, GLM, logistic, ARIMA, time series, hypothesis tests, diagnostics, AIC/BIC, for rigorous statistical inference and econometric analysis.

GitHub

data-transform

vuralserhat86

Transform raw data into analytical assets using ETL/ELT patterns, SQL (dbt), Python (pandas/polars/PySpark), and orchestration (Airflow). Use when building data pipelines, implementing incremental models, migra...

The default order uses GitHub repository stars from our indexed data. Stars belong to the source repository and may be shared by multiple skills. They indicate repository interest, not skill installs or an independent quality score.

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