Discover blockchain computational chemistry skills, compare source repositories and read the instructions for each workflow.
Cell type regulatory analysis using gcell. Use this skill when users ask about: - Loading pre-inferred cell types (GET model outputs) - Gene-by-motif matrices showing TF influence on genes - Gene Jacobian analy...
Causal network analysis using gcell. Use this skill when users ask about: - Inferring causal relationships from expression data - LiNGAM causal discovery algorithm - Regulatory network construction - Visualizin...
Protein structure and interaction analysis using gcell. Use this skill when users ask about: - Protein sequences from gene names - AlphaFold2 structure predictions and pLDDT scores - UniProt protein information...
adversarial review via spawned antithesis agent. use to prune false positives from EXISTING findings. NOT for discovery or when claim is verifiable against single source.
Calculate SAPS-II (Simplified Acute Physiology Score II) for ICU patients in MIMIC-IV. Use for mortality prediction, severity assessment, or international ICU benchmarking.
Calculate norepinephrine-equivalent dose for vasopressor comparison in MIMIC-IV. Use for hemodynamic support quantification, shock severity assessment, or vasopressor weaning studies.
Calculate LODS (Logistic Organ Dysfunction Score) for ICU patients in MIMIC-IV. Use for organ dysfunction assessment across 6 systems with weighted scoring.
Calculate APACHE III (Acute Physiology Score III) for ICU patients in MIMIC-IV. Use for mortality prediction, severity stratification, case-mix adjustment, or risk-adjusted outcome comparisons.
Extract and calculate Glasgow Coma Scale (GCS) for ICU patients in MIMIC-IV. Use for neurological assessment, consciousness monitoring, or trauma severity scoring.
Start a structured clinical research session. Triggers on "/research", "start research", "new study", "analyze cohort", "investigate hypothesis", "research question", or when users describe clinical research go...
Calculate SOFA (Sequential Organ Failure Assessment) score for ICU patients in MIMIC-IV. Use for sepsis severity assessment, organ dysfunction quantification, mortality prediction, or Sepsis-3 criteria evaluati...
Identify first ICU stays and first hospital admissions in MIMIC-IV for cohort selection. Use to exclude readmissions, create independent observations, or build adult patient cohorts.
Calculate OASIS (Oxford Acute Severity of Illness Score) for ICU patients in MIMIC-IV. Use for mortality prediction with fewer variables than APACHE/SAPS, or when lab data is limited.
Calculate KDIGO AKI (Acute Kidney Injury) staging for ICU patients in MIMIC-IV using creatinine and urine output criteria. Use for nephrology research, AKI outcome studies, or renal function monitoring.
Estimate baseline serum creatinine for AKI assessment in MIMIC-IV. Use for KDIGO staging, AKI research, or renal function baseline establishment.
Map equivalent concepts between MIMIC-IV and eICU databases. Use for multi-database studies, external validation, or understanding structural differences between databases.
Calculate SIRS (Systemic Inflammatory Response Syndrome) criteria for ICU patients in MIMIC-IV. Use for historical sepsis definitions, inflammatory response assessment, or research comparing SIRS vs Sepsis-3.
Research and develop semantic theories using ModelChecker with Z3 SMT solver. Define operators, adjust frame constraints, create examples, run tests, and report findings. Invoke with /mc or when working with mo...
Conduct general research using web search, documentation, and codebase exploration. Invoke for non-Lean research tasks.
Research Python/Z3 patterns and APIs for semantic theory development. Invoke for Python-language research tasks.
Check if medicinal chemistry papers are in ChEMBL database to access curated bioactivity data
Use parallel subagents for large-scale paper screening and deep dive analysis
Launch and manage D3 (DNA Discrete Diffusion) sampling experiments on SLURM clusters. This skill handles job submission, WandB tracking, and result management for genomic datasets (LentiMPRA, DeepSTARR, Promote...
Professional malware analysis report creation for enterprise malware analysis and incident response. Use when the user needs to create, structure, or improve a malware analysis report, write technical documenta...
The default order uses GitHub repository stars from our indexed data. Stars belong to the source repository and may be shared by multiple skills. They indicate repository interest, not skill installs or an independent quality score.