GitHub
esm
ESM2 protein language model for embeddings and sequence scoring. Use this skill when: (1) Computing pseudo-log-likelihood (PLL) scores, (2) Getting protein embeddings for clustering, (3) Filtering designs by se...
☆ 91Voir le skill
Skills IA tools scientific computing
Découvrez les skills tools scientific computing, comparez leurs dépôts et consultez leurs instructions.
Catégories: tools scientific computing
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Explorer
GitHub
protein-design-workflow
End-to-end guidance for protein design pipelines. Use this skill when: (1) Starting a new protein design project, (2) Need step-by-step workflow guidance, (3) Understanding the full design pipeline, (4) Plannin...
☆ 91Voir le skill
GitHub
rfdiffusion
Generate protein backbones using RFdiffusion, a diffusion-based generative model for de novo protein structure generation. Use this skill when: (1) Designing binder scaffolds for a target protein, (2) Generatin...
☆ 91Voir le skill
GitHub
uniprot
Access UniProt for protein sequence and annotation retrieval. Use this skill when: (1) Looking up protein sequences by accession, (2) Finding functional annotations, (3) Getting domain boundaries, (4) Finding h...
☆ 91Voir le skill
GitHub
boltzgen
All-atom protein design using BoltzGen diffusion model. Use this skill when: (1) Need side-chain aware design from the start, (2) Designing around small molecules or ligands, (3) Want all-atom diffusion (not ju...
☆ 91Voir le skill
GitHub
foldseek
Structure similarity search with Foldseek. Use this skill when: (1) Finding similar structures in PDB/AFDB databases, (2) Structural homology search, (3) Database queries by 3D structure, (4) Finding remote hom...
☆ 91Voir le skill
GitHub
boltz
Structure prediction using Boltz-1/Boltz-2, an open biomolecular structure predictor. Use this skill when: (1) Predicting protein complex structures, (2) Validating designed binders, (3) Need open-source altern...
☆ 91Voir le skill
GitHub
hypothesis-library
Curated repository of experiment hypotheses, assumptions, and historical learnings.
☆ 90Voir le skill
GitHub
ln-002-best-practices-researcher
Research best practices via MCP Ref/Context7/WebSearch and create documentation (guide/manual/ADR/research). Single research, multiple output types.
☆ 89Voir le skill
GitHub
market-analysis
Systematic market analysis skill for understanding market size, segmentation, trends, and opportunities. Produces quantified market intelligence.
☆ 86Voir le skill
GitHub
deep-research
Execute autonomous multi-step research using Google Gemini Deep Research Agent. Use for: market analysis, competitive landscaping, literature reviews, technical research, due diligence. Takes 2-10 minutes but p...
☆ 82Voir le skill
GitHub
data-analysis
Statistical analysis, outlier detection, and data transformation utilities.
☆ 76Voir le skill
GitHub
research-expert
Specialized research expert for parallel information gathering. Use for focused research tasks with clear objectives and structured output requirements.
☆ 60Voir le skill
GitHub
data-analysis
Data analysis and statistical computation. Use when user needs "数据分析/统计/计算指标/数据洞察". Supports general analysis, financial data (stocks, returns), business data (sales, users), and scientific resear...
☆ 53Voir le skill
GitHub
research-synthesis
Synthesize research findings for OAK planning using the oak.plan-research workflow. Use when consolidating findings from codebase exploration, comparing approaches, or creating research/*.md documents.
☆ 48Voir le skill
GitHub
distribution-search
Guidance for finding probability distributions that satisfy specific statistical constraints such as KL divergence targets, entropy requirements, or moment conditions. This skill should be used when tasks invol...
☆ 46Voir le skill
GitHub
mcmc-sampling-stan
Guidance for Bayesian MCMC sampling tasks using RStan. This skill applies when implementing hierarchical Bayesian models, configuring Stan/RStan for MCMC inference, or working with posterior distributions. Use...
☆ 46Voir le skill
GitHub
distribution-search
Guidance for finding probability distributions that satisfy specific statistical constraints such as KL divergence targets. This skill should be used when tasks involve constructing probability distributions wi...
☆ 46Voir le skill
GitHub
raman-fitting
This skill provides guidance for Raman spectrum peak fitting tasks. It should be used when analyzing spectroscopic data, fitting Lorentzian or Gaussian peaks to Raman spectra, or working with graphene/carbon ma...
☆ 46Voir le skill
GitHub
raman-fitting
This skill provides guidance for fitting peaks in Raman spectroscopy data, particularly for materials like graphene. Use this skill when tasks involve Raman spectrum analysis, peak fitting (G peak, 2D peak, D p...
☆ 46Voir le skill
GitHub
crack-7z-hash
This skill provides guidance for cracking 7z archive password hashes. It should be used when tasks involve extracting hashes from password-protected 7z archives, selecting appropriate cracking tools, and recove...
☆ 46Voir le skill
GitHub
crack-7z-hash
This skill provides guidance for cracking 7z archive password hashes. It should be used when tasked with recovering passwords from 7z encrypted archives, extracting and cracking 7z hashes, or working with passw...
☆ 46Voir le skill
GitHub
tune-mjcf
This skill provides guidance for optimizing MuJoCo MJCF simulation files to improve performance while maintaining physics accuracy. Use this skill when tuning simulation parameters, reducing computation time, o...
☆ 46Voir le skill
GitHub
password-recovery
Digital forensic skill for recovering passwords and sensitive data from disk images, deleted files, and binary data. This skill should be used when tasks involve extracting passwords from disk images, recoverin...
☆ 46Voir le skill
Le classement utilise les étoiles du dépôt GitHub indexé. Plusieurs skills peuvent partager ce nombre : ce n’est ni un nombre d’installations ni une note de qualité.