chipseq-qc
Performs ChIP-specific biological validation. It calculates metrics unique to protein-binding assays, such as Cross-correlation (NSC/RSC) and FRiP. Use this when you have filtered the BAM file and called peaks...
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Performs ChIP-specific biological validation. It calculates metrics unique to protein-binding assays, such as Cross-correlation (NSC/RSC) and FRiP. Use this when you have filtered the BAM file and called peaks...
This skill performs protein-mediated regulatory community analysis from ChIA-PET datasets and provide a way for visualizing the communities. Use this skill when you have a annotated peak file (in BED format) fr...
This skill performs A/B compartment shift analysis between two Hi-C samples.
Systematic approach to discovering novel vulnerabilities through code analysis, fuzzing, and attack surface research
Systematic methodology for developing reliable exploits from vulnerability discovery to weaponization
Extracts high-value insights from research documents, RCAs, design docs, and memos - filters aggressively to return only actionable information. Research equivalent of analyzing-implementations skill.
6DOF ship dynamics, equations of motion, seakeeping analysis, and natural frequency calculations
Hydrodynamic analysis using BEM, RAOs, added mass, damping, and wave loads for offshore structures
This skill should be used when the user asks to "model trends with limited data", "three-valued logic analysis", "scenario generation", "transitional graphs", "qualitative trend analysis", "uncertain data analy...
This skill should be used when the user asks to "analyze regulations", "regulatory landscape", "compliance requirements", "legal considerations", "regulatory risk", "industry regulations", "compliance analysis"...
SDD state tracking - phases, gates, lanes, and state.md structure
Invoke MEDCOM for military medical advisory, ACGME interpretation, and domain expertise. Advisory-only agent that surfaces clinical information for physician decision-making. Never makes medical decisions.
ACGME regulatory compliance expertise for medical residency scheduling. Use when validating schedules, checking work hour limits, supervision ratios, or answering compliance questions. Integrates with MCP valid...
ACGME & institutional rule checking with systematic audit workflows, historical analysis, and violation remediation. Use for compliance audits, violation investigation, and regulatory reporting.
CP-SAT constraint model for TAMC Family Medicine scheduling optimization. Use when building or debugging the OR-Tools solver for faculty/resident scheduling. Documents hard constraints, soft constraints, decisi...
Finds and quantifies redundant content in QMD files - repeated equations, duplicate sections, similar paragraphs, and structural redundancy.
Multi-phase research orchestration for thorough codebase, documentation, and external knowledge investigation. Invoked by /ai-eng/research command. Use when conducting deep analysis, exploring codebases, invest...
Predict persona performance in specific task contexts.
Interactive guidance for building Sun lab VR experiment configurations using MCP tools and CLI commands. Covers template discovery, experiment configuration generation, and Unity template creation. Use when cre...
Full ACMG/AMP variant classification workflow. Validates input, gathers evidence, applies rules, and generates classification. Invoked via /classify .
Create and validate LAMMPS input scripts with physics-aware validation and educational feedback
Use this skill when troubleshooting OpenStudio or EnergyPlus energy models that fail to simulate, have geometry errors (intersecting surfaces, non-planar surfaces, story organization issues), need HVAC validati...
Use this skill when working with OpenStudio 3.10 .osm models to adjust HVAC systems, equipment, thermal zones, schedules, or constructions, then run simulations to validate changes. Handles applying existing me...
Use this skill when analyzing EnergyPlus IDF building energy models, including QA/QC validation, HVAC topology analysis, ECM testing, or running simulations. Supports fast validation without Docker (direct pars...
Le classement utilise les étoiles du dépôt GitHub indexé. Plusieurs skills peuvent partager ce nombre : ce n’est ni un nombre d’installations ni une note de qualité.