GitHub
research
Comprehensive research, analysis, and content extraction system. USE WHEN user says 'do research', 'do extensive research', 'quick research', 'minor research', 'research this', 'find information', 'investigate'...
☆ 99查看技能
documentation scientific computing AI 技能
发现 documentation scientific computing 相关 Skills，比较来源仓库和用途，查看适合你工作流的技能说明。
分类目录: documentation scientific computing
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GitHub
chai
Structure prediction using Chai-1, a foundation model for molecular structure. Use this skill when: (1) Predicting protein-protein complex structures, (2) Validating designed binders, (3) Predicting protein-lig...
☆ 91查看技能
GitHub
pdb
Fetch and analyze protein structures from RCSB PDB. Use this skill when: (1) Need to download a structure by PDB ID, (2) Search for similar structures, (3) Prepare target for binder design, (4) Extract specific...
☆ 91查看技能
GitHub
setup
First-time setup for protein design tools. Use this skill when: (1) User is new and hasn't run any tools yet, (2) Commands fail with "file not found" or "modal: command not found", (3) Modal authentication erro...
☆ 91查看技能
GitHub
alphafold
Validate protein designs using AlphaFold2 structure prediction. Use this skill when: (1) Validating designed sequences fold correctly, (2) Predicting binder-target complex structures, (3) Calculating confidence...
☆ 91查看技能
GitHub
bindcraft
End-to-end binder design using BindCraft hallucination. Use this skill when: (1) Designing protein binders with built-in AF2 validation, (2) Running production-quality binder campaigns, (3) Using different desi...
☆ 91查看技能
GitHub
esm
ESM2 protein language model for embeddings and sequence scoring. Use this skill when: (1) Computing pseudo-log-likelihood (PLL) scores, (2) Getting protein embeddings for clustering, (3) Filtering designs by se...
☆ 91查看技能
GitHub
protein-design-workflow
End-to-end guidance for protein design pipelines. Use this skill when: (1) Starting a new protein design project, (2) Need step-by-step workflow guidance, (3) Understanding the full design pipeline, (4) Plannin...
☆ 91查看技能
GitHub
rfdiffusion
Generate protein backbones using RFdiffusion, a diffusion-based generative model for de novo protein structure generation. Use this skill when: (1) Designing binder scaffolds for a target protein, (2) Generatin...
☆ 91查看技能
GitHub
uniprot
Access UniProt for protein sequence and annotation retrieval. Use this skill when: (1) Looking up protein sequences by accession, (2) Finding functional annotations, (3) Getting domain boundaries, (4) Finding h...
☆ 91查看技能
GitHub
boltzgen
All-atom protein design using BoltzGen diffusion model. Use this skill when: (1) Need side-chain aware design from the start, (2) Designing around small molecules or ligands, (3) Want all-atom diffusion (not ju...
☆ 91查看技能
GitHub
foldseek
Structure similarity search with Foldseek. Use this skill when: (1) Finding similar structures in PDB/AFDB databases, (2) Structural homology search, (3) Database queries by 3D structure, (4) Finding remote hom...
☆ 91查看技能
GitHub
boltz
Structure prediction using Boltz-1/Boltz-2, an open biomolecular structure predictor. Use this skill when: (1) Predicting protein complex structures, (2) Validating designed binders, (3) Need open-source altern...
☆ 91查看技能
GitHub
hypothesis-library
Curated repository of experiment hypotheses, assumptions, and historical learnings.
☆ 90查看技能
GitHub
ln-002-best-practices-researcher
Research best practices via MCP Ref/Context7/WebSearch and create documentation (guide/manual/ADR/research). Single research, multiple output types.
☆ 89查看技能
GitHub
market-analysis
Systematic market analysis skill for understanding market size, segmentation, trends, and opportunities. Produces quantified market intelligence.
☆ 86查看技能
GitHub
deep-research
Execute autonomous multi-step research using Google Gemini Deep Research Agent. Use for: market analysis, competitive landscaping, literature reviews, technical research, due diligence. Takes 2-10 minutes but p...
☆ 82查看技能
GitHub
data-analysis
Statistical analysis, outlier detection, and data transformation utilities.
☆ 76查看技能
GitHub
research-expert
Specialized research expert for parallel information gathering. Use for focused research tasks with clear objectives and structured output requirements.
☆ 60查看技能
GitHub
data-analysis
Data analysis and statistical computation. Use when user needs "数据分析/统计/计算指标/数据洞察". Supports general analysis, financial data (stocks, returns), business data (sales, users), and scientific resear...
☆ 53查看技能
GitHub
research-synthesis
Synthesize research findings for OAK planning using the oak.plan-research workflow. Use when consolidating findings from codebase exploration, comparing approaches, or creating research/*.md documents.
☆ 48查看技能
GitHub
distribution-search
Guidance for finding probability distributions that satisfy specific statistical constraints such as KL divergence targets, entropy requirements, or moment conditions. This skill should be used when tasks invol...
☆ 46查看技能
GitHub
mcmc-sampling-stan
Guidance for Bayesian MCMC sampling tasks using RStan. This skill applies when implementing hierarchical Bayesian models, configuring Stan/RStan for MCMC inference, or working with posterior distributions. Use...
☆ 46查看技能
GitHub
distribution-search
Guidance for finding probability distributions that satisfy specific statistical constraints such as KL divergence targets. This skill should be used when tasks involve constructing probability distributions wi...
☆ 46查看技能
默认按已收录数据中的 GitHub 仓库 Stars 排序。Stars 属于来源仓库，同一仓库的多个技能可能共享相同数值；它反映仓库关注度，不代表单个技能的安装量或质量评分。