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blockchain computational chemistry AI 技能

发现 blockchain computational chemistry 相关 Skills,比较来源仓库和用途,查看适合你工作流的技能说明。

分类目录: blockchain computational chemistry

显示第 145–168 个,共 879 个

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GitHub

slack-proactive-intervention-patterns

krafton-ai

메모리에서 7가지 개입 기회 패턴을 감지하는 지식 베이스. 조사 제안, 스케줄링, 문서화, 초안 작성, 연결 조율, 예측적 제안, 루틴 자동화 패턴의 시그널과 점수 계산 방법.

GitHub

tooluniverse

jimmc414

Use this skill when working with scientific research tools and workflows across bioinformatics, cheminformatics, genomics, structural biology, proteomics, and drug discovery. This skill provides access to 600+...

GitHub

clinical-decision-support

jimmc414

Generate professional clinical decision support (CDS) documents for pharmaceutical and clinical research settings, including patient cohort analyses (biomarker-stratified with outcomes) and treatment recommenda...

GitHub

skill-researcher

benbrastmckie

Conduct general research using web search, documentation, and codebase exploration. Invoke for non-Lean research tasks.

GitHub

bio-pathway-gsea

GPTomics

Gene Set Enrichment Analysis using clusterProfiler gseGO and gseKEGG. Uses a ranked gene list to find coordinated changes in gene sets without requiring arbitrary significance cutoffs. Detects subtle but coordi...

GitHub

bio-transcription-translation

GPTomics

Transcribe DNA to RNA and translate to protein using Biopython. Use when converting between DNA, RNA, and protein sequences, finding ORFs, or using alternative codon tables.

GitHub

bio-proteomics-data-import

GPTomics

Load and parse mass spectrometry data formats including mzML, mzXML, and quantification tool outputs like MaxQuant proteinGroups.txt. Handles common preprocessing steps like contaminant filtering and missing va...

GitHub

bio-pathway-wikipathways

GPTomics

WikiPathways enrichment using clusterProfiler and rWikiPathways. Performs over-representation analysis and GSEA on community-curated biological pathways. WikiPathways is an open, collaborative platform with pat...

GitHub

bio-metabolomics-pathway-mapping

GPTomics

Map metabolites to biological pathways using KEGG, Reactome, and MetaboAnalyst. Perform pathway enrichment and topology analysis. Use when interpreting metabolomics results in the context of biochemical pathway...

GitHub

bio-metagenomics-amr-detection

GPTomics

Detect antimicrobial resistance genes using AMRFinderPlus, ResFinder, and CARD. Screen isolates and metagenomes for resistance determinants. Use when characterizing resistance profiles in clinical isolates, sur...

GitHub

bio-de-deseq2-basics

GPTomics

Perform differential expression analysis using DESeq2 in R/Bioconductor. Use for analyzing RNA-seq count data, creating DESeqDataSet objects, running the DESeq workflow, and extracting results with log fold cha...

GitHub

bio-alignment-statistics

GPTomics

Calculate alignment statistics including sequence identity, conservation scores, substitution matrices, and similarity metrics. Use for comparing alignment quality, measuring sequence divergence, and analyzing...

GitHub

bio-restriction-mapping

GPTomics

Create restriction maps showing enzyme cut positions on DNA sequences using Biopython Bio.Restriction. Visualize cut sites, calculate distances between sites, and generate text or graphical maps.

GitHub

bio-blast-searches

GPTomics

Run remote BLAST searches against NCBI databases using Biopython Bio.Blast. Use for sequence similarity searches, identifying unknown sequences, finding homologs, and querying NCBI's nr/nt databases.

GitHub

bio-pdb-geometric-analysis

GPTomics

Perform geometric calculations on protein structures using Biopython Bio.PDB. Use for measuring distances, angles, and dihedrals, finding neighbor atoms, superimposing structures, calculating RMSD, identifying...

GitHub

bio-primer-design-primer-validation

GPTomics

Validate PCR primers for specificity, dimers, hairpins, and secondary structures using primer3-py thermodynamic calculations. Check self-complementarity, heterodimer formation, and 3' stability.

GitHub

bio-sequence-properties

GPTomics

Calculate sequence properties like GC content, molecular weight, isoelectric point, and GC skew using Biopython. Use when analyzing sequence composition, computing physical properties, or comparing sequences.

GitHub

bio-motif-search

GPTomics

Find patterns, motifs, and subsequences in biological sequences using Biopython. Use when searching for transcription factor binding sites, regulatory elements, or any sequence pattern. For restriction enzyme a...

GitHub

bio-metabolomics-lipidomics

GPTomics

Specialized lipidomics analysis for lipid identification, quantification, and pathway interpretation. Covers LC-MS lipidomics with LipidSearch, MS-DIAL, and LipidMaps annotation. Use when analyzing lipid classe...

GitHub

bio-pdb-structure-modification

GPTomics

Modify protein structures using Biopython Bio.PDB. Use for transforming coordinates, removing atoms or residues, adding new entities, modifying B-factors and occupancies, renumbering residues, and building stru...

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