metabolicpathwayactivity

Features and purpose

Calculates pathway activity scores for metabolic pathways across different cell groups and subsets. This process quantifies the metabolic activity of each pathway per group, generating visualizations (heatmaps and violin plots) to compare metabolic states between clusters or conditions. Based on the methodology from Xiao et al.

Quick start

Follow the repository instructions for this skill and your agent. Review the files and dependencies before adding it to your workflow.