bio-workflow-management-snakemake-workflows

Features and purpose

Build reproducible bioinformatics pipelines with Snakemake using rules, wildcards, and automatic dependency resolution. Use when creating Python-based workflows, automating multi-step analyses with make-like dependency tracking, or running pipelines on HPC clusters with SLURM.

Quick start

Follow the repository instructions for this skill and your agent. Review the files and dependencies before adding it to your workflow.