bio-read-qc-fastp-workflow

Features and purpose

All-in-one read preprocessing with fastp including adapter trimming, quality filtering, deduplication, base correction, and HTML report generation. Use when preprocessing Illumina data and wanting a single fast tool instead of separate Cutadapt, Trimmomatic, and FastQC steps.

Quick start

Follow the repository instructions for this skill and your agent. Review the files and dependencies before adding it to your workflow.