bio-longread-structural-variants

Features and purpose

Detect structural variants from long-read alignments using Sniffles, cuteSV, and SVIM. Use when detecting deletions, insertions, inversions, translocations, or complex rearrangements from ONT or PacBio data, especially those missed by short-read methods.

Quick start

Follow the repository instructions for this skill and your agent. Review the files and dependencies before adding it to your workflow.