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julia-scientific
Julia package equivalents for 137 K-Dense-AI scientific skills. Maps Python bioinformatics, chemistry, ML, quantum, and data science packages to native Julia ecosystem.
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tools scientific computing AI Skills
Discover tools scientific computing skills, compare source repositories and read the instructions for each workflow.
Categories: tools scientific computing
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coupled-system
Interacting dynamical systems
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GitHub
crn-topology
Chemical Reaction Network topology for generating and analyzing reaction
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GitHub
langevin-dynamics
Layer 5: SDE-Based Learning Analysis via Langevin Dynamics
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GitHub
kuramoto-model
Coupled oscillators with sinusoidal coupling
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GitHub
olmoearth-mlx
OlmoEarth MLX: Spatio-Temporal Earth Intelligence
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chaotic-attractor
Strange attractor with sensitive dependence on initial conditions
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kolmogorov-compression
Kolmogorov complexity as the ultimate intelligence measure. Shortest
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linearization
Local approximation of nonlinear dynamics
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research
Research technical solutions by searching the web, examining GitHub repos, and gathering evidence. Use when exploring implementation options or evaluating technologies.
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GitHub
investigate
Deep analytical investigation mode using Bayesian reasoning, superforecasting techniques, and rigorous hypothesis testing. Combines methods from Kahneman, Tetlock, Peirce, and Feynman. Use when user invokes /in...
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GitHub
pipeline-tracker
Global drug development pipeline tracking by disease, target, mechanism, or company. Use for competitive intelligence, opportunity identification, and trend analysis. Keywords: pipeline, drug development, clin...
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GitHub
target-profile
Generate comprehensive target profiles including druggability assessment, disease associations, pathway context, and competitive landscape. Use this skill when analyzing drug targets for validation, dossier cr...
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GitHub
compound-profile
Generate comprehensive compound profiles including structure, properties, bioactivity, and development status. Use for drug analysis, SAR studies, and competitive profiling. Keywords: compound, drug, molecule,...
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GitHub
report-generator
Generate professional drug discovery reports including target dossiers, competitive briefs, and Go/No-Go decision summaries. Use this skill when you need formatted reports for presentations, decision meetings,...
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GitHub
writing-papers
Create interactive HTML artifacts for academic papers using parallel subagent processing. Includes comprehensive pre-submission review checklist for paper quality assurance.
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GitHub
perplexity-researcher-pro
Complex research requiring deeper analysis, multi-step reasoning, and sophisticated source evaluation for technical, academic, or specialized domain queries needing expert-level analysis, high-stakes decisions,...
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GitHub
research-workflow
Systematic research workflow orchestrating multi-source research operations for comprehensive domain investigation. Sequential workflow from web search through GitHub exploration and documentation analysis to r...
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GitHub
multi-ai-research
Comprehensive research and analysis using Claude (subagents), Gemini CLI, and Codex CLI. Multi-perspective research with cross-verification, iterative refinement, and 100% citation coverage. Use for security an...
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GitHub
deep-research
Deep research on technical topics using EXA tools with intelligent two-tier caching. Use when user asks to research a topic, investigate best practices, look up information, find patterns, or explore architectu...
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GitHub
lifesciences-graph-builder
Orchestrates life sciences APIs to build knowledge graphs using the Fuzzy-to-Fact protocol, combining MCPs for nodes and curl for edges, then persisting to Graphiti. This skill should be used when the user asks...
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GitHub
lifesciences-proteomics
Queries protein databases (UniProt, STRING, BioGRID) via curl for protein lookups, protein-protein interactions, functional enrichment analysis, and cross-database ID mapping. This skill should be used when the...
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GitHub
lifesciences-clinical
Queries clinical databases (Open Targets, ClinicalTrials.gov) via curl for target-disease associations, target tractability assessment, and clinical trial discovery. This skill should be used when the user asks...
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GitHub
lifesciences-genomics
Queries genomic databases (Ensembl, NCBI, HGNC) via curl for gene lookup, variant annotation, orthology, and cross-database ID resolution. This skill should be used when the user asks to "annotate variants", "f...
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