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GitHub

bio-restriction-fragment-analysis

GPTomics

Analyze restriction digest fragments using Biopython Bio.Restriction. Predict fragment sizes, get fragment sequences, simulate gel electrophoresis patterns, and perform double digests.

GitHub

bio-metagenomics-strain-tracking

GPTomics

Track bacterial strains using MASH, sourmash, fastANI, and inStrain. Compare genomes, detect contamination, and monitor strain-level variation. Use when needing sub-species resolution for outbreak tracking, tra...

GitHub

bio-chipseq-differential-binding

GPTomics

Differential binding analysis using DiffBind. Compare ChIP-seq peaks between conditions with statistical rigor. Requires replicate samples. Outputs differentially bound regions with fold changes and p-values.

GitHub

bio-workflows-proteomics-pipeline

GPTomics

End-to-end proteomics workflow from MaxQuant output to differential protein abundance. Orchestrates data import, normalization, imputation, and statistical testing with MSstats or limma.

GitHub

bio-pdb-structure-navigation

GPTomics

Navigate protein structure hierarchy using Biopython Bio.PDB SMCRA model. Use for accessing models, chains, residues, and atoms, iterating over structure levels, extracting sequences, identifying residue types,...

GitHub

bio-data-visualization-genome-tracks

GPTomics

Create genome browser-style visualizations showing multiple data tracks (coverage, peaks, genes) using pyGenomeTracks, Gviz, and IGV. Use when visualizing genomic data at specific loci with multiple aligned tra...

GitHub

bio-chipseq-visualization

GPTomics

Visualize ChIP-seq data using deepTools, Gviz, and ChIPseeker. Create heatmaps, profile plots, and genome browser tracks. Visualize signal around peaks, TSS, or custom regions.

GitHub

bio-read-alignment-star-alignment

GPTomics

Align RNA-seq reads with STAR (Spliced Transcripts Alignment to a Reference). Use for RNA-seq data requiring splice-aware alignment. Supports two-pass mode for novel splice junction discovery.

GitHub

sounds-on-the-web

raphaelsalaja

Guidelines for implementing audio feedback in web interfaces. Use when adding sound to interactions, reviewing audio UX, or designing notification systems. Triggers on tasks involving user feedback, confirmatio...

GitHub

android-viewmodel

new-silvermoon

Best practices for implementing Android ViewModels, specifically focused on StateFlow for UI state and SharedFlow for one-off events.

GitHub

android-data-layer

new-silvermoon

Guidance on implementing the Data Layer using Repository pattern, Room (Local), and Retrofit (Remote) with offline-first synchronization.

GitHub

gradle-build-performance

new-silvermoon

Debug and optimize Android/Gradle build performance. Use when builds are slow, investigating CI/CD performance, analyzing build scans, or identifying compilation bottlenecks.

GitHub

android-coroutines

new-silvermoon

Authoritative rules and patterns for production-quality Kotlin Coroutines onto Android. Covers structured concurrency, lifecycle integration, and reactive streams.

GitHub

android-testing

new-silvermoon

Comprehensive testing strategy involving Unit, Integration, Hilt, and Screenshot tests.

GitHub

compose-navigation

new-silvermoon

Implement navigation in Jetpack Compose using Navigation Compose. Use when asked to set up navigation, pass arguments between screens, handle deep links, or structure multi-screen apps.

GitHub

android-accessibility

new-silvermoon

Expert checklist and prompts for auditing and fixing Android accessibility issues, especially in Jetpack Compose.

GitHub

android-gradle-logic

new-silvermoon

Expert guidance on setting up scalable Gradle build logic using Convention Plugins and Version Catalogs.

GitHub

compose-performance-audit

new-silvermoon

Audit and improve Jetpack Compose runtime performance from code review and architecture. Use when asked to diagnose slow rendering, janky scrolling, excessive recompositions, or performance issues in Compose UI...

GitHub

kotlin-concurrency-expert

new-silvermoon

Kotlin Coroutines review and remediation for Android. Use when asked to review concurrency usage, fix coroutine-related bugs, improve thread safety, or resolve lifecycle issues in Kotlin/Android code.

GitHub

android-architecture

new-silvermoon

Expert guidance on setting up and maintaining a modern Android application architecture using Clean Architecture and Hilt. Use this when asked about project structure, module setup, or dependency injection.

GitHub

xml-to-compose-migration

new-silvermoon

Convert Android XML layouts to Jetpack Compose. Use when asked to migrate Views to Compose, convert XML to Composables, or modernize UI from View system to Compose.

GitHub

compose-ui

new-silvermoon

Best practices for building UI with Jetpack Compose, focusing on state hoisting, detailed performance optimizations, and theming. Use this when writing or refactoring Composable functions.

GitHub

pseudo-elements

raphaelsalaja

Guidelines for using modern CSS pseudo-elements beyond ::before and ::after. Use when styling native browser features, implementing view transitions, or reducing JavaScript dependencies. Triggers on tasks invol...

GitHub

12-principles-of-animation

raphaelsalaja

Guidelines for applying Disney's 12 principles of animation to web interfaces. Use when implementing motion, reviewing animation quality, or designing micro-interactions. Triggers on tasks involving CSS animati...

The default order uses GitHub repository stars from our indexed data. Stars belong to the source repository and may be shared by multiple skills. They indicate repository interest, not skill installs or an independent quality score.

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