GitHub
bio-database-access-uniprot-access
Access UniProt protein database for sequences, annotations, and functional information. Use when you need protein data, GO terms, domain annotations, or protein-protein interactions.
☆ 299View skill
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GitHub
bio-copy-number-cnv-annotation
Annotate CNVs with genes, pathways, and clinical significance. Use to interpret CNV calls and identify affected genes.
☆ 299View skill
GitHub
bio-proteomics-spectral-libraries
Build, manage, and search spectral libraries for proteomics. Covers DDA-based library generation, predicted libraries (Prosit, DeepLC), and library formats.
☆ 299View skill
GitHub
bio-restriction-fragment-analysis
Analyze restriction digest fragments using Biopython Bio.Restriction. Predict fragment sizes, get fragment sequences, simulate gel electrophoresis patterns, and perform double digests.
☆ 299View skill
GitHub
bio-metagenomics-strain-tracking
Track bacterial strains using MASH, sourmash, fastANI, and inStrain. Compare genomes, detect contamination, and monitor strain-level variation. Use when needing sub-species resolution for outbreak tracking, tra...
☆ 299View skill
GitHub
bio-chipseq-differential-binding
Differential binding analysis using DiffBind. Compare ChIP-seq peaks between conditions with statistical rigor. Requires replicate samples. Outputs differentially bound regions with fold changes and p-values.
☆ 299View skill
GitHub
bio-workflows-proteomics-pipeline
End-to-end proteomics workflow from MaxQuant output to differential protein abundance. Orchestrates data import, normalization, imputation, and statistical testing with MSstats or limma.
☆ 299View skill
GitHub
bio-pdb-structure-navigation
Navigate protein structure hierarchy using Biopython Bio.PDB SMCRA model. Use for accessing models, chains, residues, and atoms, iterating over structure levels, extracting sequences, identifying residue types,...
☆ 299View skill
GitHub
bio-data-visualization-genome-tracks
Create genome browser-style visualizations showing multiple data tracks (coverage, peaks, genes) using pyGenomeTracks, Gviz, and IGV. Use when visualizing genomic data at specific loci with multiple aligned tra...
☆ 299View skill
GitHub
bio-chipseq-visualization
Visualize ChIP-seq data using deepTools, Gviz, and ChIPseeker. Create heatmaps, profile plots, and genome browser tracks. Visualize signal around peaks, TSS, or custom regions.
☆ 299View skill
GitHub
bio-read-alignment-star-alignment
Align RNA-seq reads with STAR (Spliced Transcripts Alignment to a Reference). Use for RNA-seq data requiring splice-aware alignment. Supports two-pass mode for novel splice junction discovery.
☆ 299View skill
GitHub
sounds-on-the-web
Guidelines for implementing audio feedback in web interfaces. Use when adding sound to interactions, reviewing audio UX, or designing notification systems. Triggers on tasks involving user feedback, confirmatio...
☆ 299View skill
GitHub
android-viewmodel
Best practices for implementing Android ViewModels, specifically focused on StateFlow for UI state and SharedFlow for one-off events.
☆ 298View skill
GitHub
android-data-layer
Guidance on implementing the Data Layer using Repository pattern, Room (Local), and Retrofit (Remote) with offline-first synchronization.
☆ 298View skill
GitHub
gradle-build-performance
Debug and optimize Android/Gradle build performance. Use when builds are slow, investigating CI/CD performance, analyzing build scans, or identifying compilation bottlenecks.
☆ 298View skill
GitHub
android-coroutines
Authoritative rules and patterns for production-quality Kotlin Coroutines onto Android. Covers structured concurrency, lifecycle integration, and reactive streams.
☆ 298View skill
GitHub
android-testing
Comprehensive testing strategy involving Unit, Integration, Hilt, and Screenshot tests.
☆ 298View skill
GitHub
compose-navigation
Implement navigation in Jetpack Compose using Navigation Compose. Use when asked to set up navigation, pass arguments between screens, handle deep links, or structure multi-screen apps.
☆ 298View skill
GitHub
android-accessibility
Expert checklist and prompts for auditing and fixing Android accessibility issues, especially in Jetpack Compose.
☆ 298View skill
GitHub
android-gradle-logic
Expert guidance on setting up scalable Gradle build logic using Convention Plugins and Version Catalogs.
☆ 298View skill
GitHub
compose-performance-audit
Audit and improve Jetpack Compose runtime performance from code review and architecture. Use when asked to diagnose slow rendering, janky scrolling, excessive recompositions, or performance issues in Compose UI...
☆ 298View skill
GitHub
kotlin-concurrency-expert
Kotlin Coroutines review and remediation for Android. Use when asked to review concurrency usage, fix coroutine-related bugs, improve thread safety, or resolve lifecycle issues in Kotlin/Android code.
☆ 298View skill
GitHub
android-architecture
Expert guidance on setting up and maintaining a modern Android application architecture using Clean Architecture and Hilt. Use this when asked about project structure, module setup, or dependency injection.
☆ 298View skill
GitHub
xml-to-compose-migration
Convert Android XML layouts to Jetpack Compose. Use when asked to migrate Views to Compose, convert XML to Composables, or modernize UI from View system to Compose.
☆ 298View skill
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