GitHub
research
Research topics by verifying actual source content. Use when asked to research or study links and documentation.
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documentation scientific computing AI Skills
Discover documentation scientific computing skills, compare source repositories and read the instructions for each workflow.
Categories: documentation scientific computing
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GitHub
research
Diagnose research quality and guide systematic query expansion. Use when starting research on any topic, when stuck in research, or when unsure if research is complete.
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GitHub
data-scientist
Data Scientist Agent. ML 모델 개발, 실험, 분석을 담당합니다.
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GitHub
aind-infrastructure
Knowledge about AIND data infrastructure including MongoDB/DocumentDB access patterns, S3 asset storage, collection schemas, and query patterns. Use when working with AIND analysis results, querying metadata, o...
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GitHub
research
Research topics by verifying actual source content. Use when asked to research or study links and documentation.
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GitHub
scientific-computing
Use when "scientific computing", "astronomy", "astropy", "bioinformatics", "biopython", "symbolic math", "sympy", "statistics", "statsmodels", "scientific Python"
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GitHub
pymc
Use when "PyMC", "Bayesian", "MCMC", "probabilistic programming", or asking about "Bayesian regression", "hierarchical model", "NUTS sampler", "posterior distribution", "prior predictive", "credible intervals",...
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GitHub
data-analyst
Analyze data, identify trends, and generate visualization recommendations
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GitHub
rlm-patterns
Library of Recursive Language Model analysis patterns. Reference when designing analysis strategies for large documents.
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GitHub
alphafold-database
Access AlphaFold 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files, analyze confidence metrics (pLDDT, PAE), for drug discovery and structural biology.
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GitHub
time-series-analysis
Temporal pattern detection and forecasting. Use when analyzing trends over time, detecting seasonality, identifying anomalies in time series, or building simple forecasting models.
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GitHub
ab-test-analysis
Rigorous A/B test statistical analysis. Use when analyzing experiment results, calculating statistical significance, checking for sample ratio mismatch, or validating test design before launch.
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GitHub
nmrxiv
Search and download NMR spectroscopy datasets from nmrxiv.org. Use when the user asks to find NMR data, search for HSQC/HMBC/COSY/DEPT experiments, look up compounds by name or SMILES, download NMR datasets, or...
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GitHub
red-team-research
Adversarial research validation using Red Team/Blue Team methodology. Use when researching complex topics, fact-checking claims, or producing research reports. Validates outputs through Gemini 3 Pro critic befo...
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GitHub
weaver
Map-Reduce system for comprehensive reports and literature reviews. Breaks topic into chapters, researches each in parallel, then weaves into unified document. Use for deep research, reports, and synthesis.
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GitHub
rapidata-use
Use for Rapidata Python SDK tasks: authenticate with RapidataClient, submit labeling orders from datasets (compare/classification/ranking/free-text/locate/draw/select-words/timestamp), apply filters/settings/se...
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GitHub
ww-analyze
Deep analysis workflows for World Weaver memory systems, code, and architecture
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GitHub
galaxy-automation
BioBlend and Planemo expertise for Galaxy workflow automation. Galaxy API usage, workflow invocation, status checking, error handling, batch processing, and dataset management. Essential for any Galaxy automati...
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GitHub
jupyter-notebook-analysis
Patterns for analyzing, improving, and documenting Jupyter notebooks for scientific data analysis. Includes data filtering, visualization optimization, and resource analysis techniques.
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GitHub
risk-assessment
Evaluates investment risks, performs Monte Carlo simulations, and generates risk reports. Use when analyzing portfolio risk, stress testing, or regulatory compliance.
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GitHub
compsci-math
Comprehensive computational mathematics toolkit for Claude Code agents. Provides tools for five core domains from MIT's Mathematics for Computer Science curriculum - Proofs (propositions, predicates, induction,...
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GitHub
zscore
Calculate z-scores for speleothem geochemical data. Use when analyzing cave isotope anomalies, finding significant deviations, or identifying potential earthquake signals. Triggers on "zscore", "calculate z", "...
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GitHub
regional-doc
Generate regional analysis document templates for paleoseismic research. Use when starting analysis of a new cave or event, creating standardized documentation. Triggers on "new regional doc", "create analysis"...
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GitHub
smith-research
Proactive research protocol for version queries, APIs, and best practices. Use when answering questions about library versions, API documentation, or technology assessments. Covers research triggers, source cit...
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