GitHub
bulk-wgcna-analysis-with-omicverse
Assist Claude in running PyWGCNA through omicverse—preprocessing expression matrices, constructing co-expression modules, visualising eigengenes, and extracting hub genes.
☆ 834View skill
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GitHub
data-viz-plots
Create publication-quality plots and visualizations using matplotlib and seaborn. Works with ANY LLM provider (GPT, Gemini, Claude, etc.).
☆ 834View skill
GitHub
single-cell-clustering-and-batch-correction-with-omicverse
Guide Claude through omicverse's single-cell clustering workflow, covering preprocessing, QC, multimethod clustering, topic modeling, cNMF, and cross-batch integration as demonstrated in t_cluster.ipynb and t_s...
☆ 834View skill
GitHub
single-cell-annotation-skills-with-omicverse
Guide Claude through SCSA, MetaTiME, CellVote, CellMatch, GPTAnno, and weighted KNN transfer workflows for annotating single-cell modalities.
☆ 834View skill
GitHub
single-cell-downstream-analysis
Checklist-style reference for OmicVerse downstream tutorials covering AUCell scoring, metacell DEG, and related exports.
☆ 834View skill
GitHub
bench-debug
Debug specific document parsing failures
☆ 831View skill
GitHub
bench
Run benchmark and analyze PDF parsing performance
☆ 831View skill
GitHub
azure-ai-voicelive
Build real-time voice AI applications using Azure AI Voice Live SDK (azure-ai-voicelive). Use this skill when creating Python applications that need real-time bidirectional audio communication with Azure AI, in...
☆ 830View skill
GitHub
azure-ai-search-python
Clean code patterns for Azure AI Search Python SDK (azure-search-documents). Use when building search applications, creating/managing indexes, implementing agentic retrieval with knowledge bases, or working wit...
☆ 830View skill
GitHub
foundry-nextgen-frontend
Build elegant frontend UIs following Microsoft Foundry's NextGen Design System using Vite + React + pnpm + Framer Motion. Use when creating dashboards, agent builders, data grids, entity management interfaces,...
☆ 830View skill
GitHub
github-issue-creator
Convert raw notes, error logs, voice dictation, or screenshots into crisp GitHub-flavored markdown issue reports. Use when the user pastes bug info, error messages, or informal descriptions and wants a structur...
☆ 830View skill
GitHub
better-result-adopt
Migrate codebase from try/catch or Promise-based error handling to better-result. Use when adopting Result types, converting thrown exceptions to typed errors, or refactoring existing error handling to railway-...
☆ 817View skill
GitHub
textual-ui-developer
Develop and improve the MassGen Textual TUI by running it in a browser via textual-serve and using Claude's browser tool for visual feedback.
☆ 817View skill
GitHub
rag-skills
RAG-specific best practices for LlamaIndex, ChromaDB, and Celery workers. Covers ingestion, retrieval, embeddings, and performance.
☆ 816View skill
GitHub
server-skills
Server-specific best practices for FastAPI, Celery, and Pydantic. Extends python-skills with framework-specific patterns.
☆ 816View skill
GitHub
cli-skills
CLI best practices for LlamaFarm. Covers Cobra, Bubbletea, Lipgloss patterns for Go CLI development.
☆ 816View skill
GitHub
runtime-skills
Universal Runtime best practices for PyTorch inference, Transformers models, and FastAPI serving. Covers device management, model loading, memory optimization, and performance tuning.
☆ 816View skill
GitHub
reflect
Analyze the current session and propose improvements to skills. **Proactively invoke this skill** when you notice user corrections after skill usage, or at the end of skill-heavy sessions. Also use when user sa...
☆ 816View skill
GitHub
commit-push-pr
Commit changes, push to GitHub, and open a PR. Includes quality checks (security, patterns, simplification). Use --quick to skip checks.
☆ 816View skill
GitHub
temp-files
Guidelines for creating temporary files in system temp directory. Use when agents need to create reports, logs, or progress files without cluttering the repository.
☆ 816View skill
GitHub
designer-skills
Designer subsystem patterns for LlamaFarm. Covers React 18, TanStack Query, TailwindCSS, and Radix UI.
☆ 816View skill
GitHub
generate-subsystem-skills
Generate specialized skills for each subsystem in the monorepo. Creates shared language skills and subsystem-specific checklists for high-quality AI code generation.
☆ 816View skill
GitHub
electron-skills
Electron patterns for LlamaFarm Desktop. Covers main/renderer processes, IPC, security, and packaging.
☆ 816View skill
GitHub
typescript-skills
Shared TypeScript best practices for Designer and Electron subsystems.
☆ 816View skill
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