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epidemiological-analysis
Standard Operating Procedure for conducting epidemiological analysis with Epiverse-TRACE tools.
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databases bioinformatics AI Skills
Discover databases bioinformatics skills, compare source repositories and read the instructions for each workflow.
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phoenix-capital-exit-investigator
Capital allocation and exit recycling investigator. Use when working on low-confidence modules like capital allocation and exit recycling.
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cross-system-analyst
Analyzes relationships and connections between body systems, identifying root causes and hidden patterns in medical data.
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html-builder
Transforms medical analysis reports into stunning, personalized, data-driven Health Realms using intelligent visualization.
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data-structurer
Extracts structured, chart-ready JSON data from medical analysis for visualization, including diagnoses, timeline, prognosis, and supplement schedules.
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medical-analysis
Agentic medical analyst that explores extracted documents iteratively like a real physician - forming hypotheses, seeking evidence, cross-referencing, and building comprehensive analysis through multiple explor...
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synthesizer
Merges medical analysis and cross-system insights into a cohesive, prioritized, patient-facing narrative while preserving all rich content from the agentic analysis.
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rfd3-reference
RFdiffusion3 protein design reference. Use when working with RFD3, contigs, symmetry, hotspots, fixed atoms, RASA conditioning, H-bond conditioning, or Foundry API. Covers all input parameters, design types, an...
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GitHub
bindcraft-reference
BindCraft protein binder design reference. Use when working with AF2 backpropagation, binder design, interface optimization, PyRosetta metrics, design filtering, or comparing with RFdiffusion approaches.
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GitHub
ligandmpnn-reference
LigandMPNN sequence design reference. Use when working with LigandMPNN, ProteinMPNN, sequence design, amino acid biasing, fixed residues, temperature, side chain packing, or membrane protein design.
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GitHub
stan-coding
Best practices for writing efficient, clean Stan programs
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segmentation
Isolates skin regions from background clutter using calibrated thresholds for downstream analysis
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GitHub
goap-orchestrator
Central Goal-Oriented Action Planning orchestrator that plans and executes clinical analysis pipelines
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GitHub
data-analysis
Statistical analysis and data exploration workflows for effective data-driven insights. Use when analyzing datasets, performing exploratory data analysis (EDA), statistical hypothesis testing, data visualizatio...
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GitHub
mip-annotate
Phase 2 of MIP pipeline - Orchestrate parallel annotation of all 9 chapters using subagents. Each chapter analyzed independently for metaphors.
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mip-cluster
Phase 3 of MIP pipeline - Cluster all metaphor annotations into 4 major CMT systems, with quantitative analysis.
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GitHub
mip-research
Phase 1 of MIP pipeline - Research Gatsby metaphor scholarship, establish seed CMT systems, and document MIP procedure for annotators.
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rweq-proofs
Helps construct RwEq (rewrite equivalence) proofs using transitivity, congruence, and canonical lemmas from the LND_EQ-TRS system. Use when proving path equalities, working with quotients, or establishing rewri...
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GitHub
rweq-proofs
Helps construct RwEq (rewrite equivalence) proofs using transitivity, congruence, and canonical lemmas from the LND_EQ-TRS system. Use when proving path equalities, working with quotients, or establishing rewri...
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GitHub
novelty-gap-mapper
evidence-scoutの結果を受け、研究ギャップを体系的にマッピングし、 新規性の高い研究機会を特定・スコアリングする。EHR-RWDの優位性を活かした差別化ポイントを明確化。
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GitHub
epsilon-yajna
Convert verbose memories to SSL v0.2 format - I am encoder AND decoder
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GitHub
lucy-ngcase
Full de novo structure elucidation - skip dereplication and solve the structure from NMR correlations. Use when dereplication returned no matches, the compound is known to be novel, or you want to solve the str...
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GitHub
lucy-ng
Computer-Assisted Structure Elucidation (CASE) for organic natural products using NMR spectroscopy. Use when the user asks to identify an unknown compound from NMR data, perform structure elucidation, analyze H...
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GitHub
analysis
Symmetry analysis, Lyapunov exponent chaos detection, and period detection APIs. Use when analyzing CA states, detecting patterns, measuring stability, or classifying dynamic behavior.
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