GitHub
pyopenms
Mass spectrometry toolkit (OpenMS Python). Process mzML/mzXML, peak picking, feature detection, peptide ID, proteomics/metabolomics workflows, for LC-MS/MS analysis.
☆ 26View skill
Search results for “Python”
Skills matching the name, description or GitHub author.
Categories: Data & AI
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GitHub
gget
CLI/Python toolkit for rapid bioinformatics queries. Preferred for quick BLAST searches. Access to 20+ databases: gene info (Ensembl/UniProt), AlphaFold, ARCHS4, Enrichr, OpenTargets, COSMIC, genome downloads....
☆ 26View skill
GitHub
dnanexus-integration
DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution.
☆ 26View skill
GitHub
datamol
Pythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug discovery: SMILES parsing, standardization, descriptors, fingerprints, clustering, 3D conformers, paral...
☆ 26View skill
GitHub
python-testing
Expert in Python testing with pytest and test-driven development
☆ 26View skill
GitHub
async-expert
Expert in asynchronous programming patterns across languages (Python asyncio, JavaScript/TypeScript promises, C# async/await, Rust futures). Use for concurrent programming, event loops, async patterns, error ha...
☆ 25View skill
GitHub
python
Backend services development with Python emphasizing security, performance, and maintainability for JARVIS AI Assistant
☆ 25View skill
GitHub
fastapi-expert
Expert FastAPI developer specializing in production-ready async REST APIs with Pydantic v2, SQLAlchemy 2.0, OAuth2/JWT authentication, and comprehensive security. Deep expertise in dependency injection, backgro...
☆ 25View skill
GitHub
fastmcp
Build MCP servers in Python with FastMCP framework to expose tools, resources, and prompts to LLMs. Supports storage backends (memory/disk/Redis), middleware, OAuth Proxy, OpenAPI integration, and FastMCP Cloud...
☆ 25View skill
GitHub
analytics-data-analysis
Implement analytics, data analysis, and visualization best practices using Python, Jupyter, and modern data tools.
☆ 25View skill
GitHub
web-scraping
Expert in web scraping and data extraction with Python tools
☆ 25View skill
GitHub
scrapy-web-scraping
Expert guidance for building web scrapers and crawlers using the Scrapy Python framework with best practices for spider development, data extraction, and pipeline management.
☆ 25View skill
GitHub
blazemeter-functional-testing
Comprehensive guide for BlazeMeter Functional Testing, including GUI Functional Tests, API Tests (deprecated), Action Library, and debugging. Use when working with Functional Testing for (1) Creating GUI Functi...
☆ 24View skill
GitHub
bg3se-macos-ghidra
Develop the BG3 Script Extender macOS port using Ghidra for reverse engineering. Use this skill when: (1) Working on bg3se-macos port development or debugging (2) Using Ghidra to discover offsets, function addr...
☆ 24View skill
GitHub
python-script
Create robust Python automation with full logging and safety checks. Use when tasks need complex data processing, authenticated API work, conditional file operations, or error handling beyond simple shell comma...
☆ 23View skill
GitHub
single-file-uv-scripter
Creates self-contained Python scripts with inline PEP 723 metadata for UV. Embeds dependencies directly in script headers for zero-config execution via `uv run`. Triggers on keywords: uv script, single file scr...
☆ 23View skill
GitHub
python-code-review
Reviews Python code for type safety, async patterns, error handling, and common mistakes. Use when reviewing .py files, checking type hints, async/await usage, or exception handling.
☆ 23View skill
GitHub
dependency-manager
Manage Python dependencies using UV, pip-tools, or requirements.txt. Use when setting up dependency management, resolving conflicts, or choosing between UV, pip-tools, and requirements.txt workflows.
☆ 23View skill
GitHub
api-docs-generator
Generates API documentation from code including OpenAPI specs, JSDoc, and Python docstrings. Use when documenting APIs, REST endpoints, or library functions.
☆ 23View skill
GitHub
python-packaging
Configure Python package metadata, setup.py, and pyproject.toml for distribution using UV or setuptools. Use when setting up Python packages, configuring build systems, or preparing projects for PyPI publicatio...
☆ 23View skill
GitHub
add-tests
Add comprehensive tests for Python code with pytest
☆ 23View skill
GitHub
coding-python
When python, flask, or jinja are being written or edited.
☆ 22View skill
GitHub
plugin-creator
Comprehensive plugin development skill for Claude Code. Analyzes business requirements and creates complete plugins including MCP servers, skills, slash commands, or combinations thereof. Supports TypeScript, P...
☆ 22View skill
GitHub
data-gouv
Skill professionnel pour Claude Code permettant d'accéder, télécharger et analyser les données ouvertes françaises via data.gouv.fr. Inclut une librairie Python complète, des exemples de code, et une documentat...
☆ 22View skill
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