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seuratclustering

Performs unsupervised clustering on single-cell RNA-seq data using Seurat. This process finds nearest neighbors, computes UMAP for visualization, and applies Louvain/Leiden algorithms to identify cell clusters. Clusters can be explored at multiple resolutions to balance granularity and biological relevance.

pwwang☆ 20 Repository stars4 Repository forks

Installation

Follow the repository instructions for this skill and your agent. Review the files and dependencies before adding it to your workflow.

View source ↗Guides

Skill instructions

Features and purpose

Performs unsupervised clustering on single-cell RNA-seq data using Seurat. This process finds nearest neighbors, computes UMAP for visualization, and applies Louvain/Leiden algorithms to identify cell clusters. Clusters can be explored at multiple resolutions to balance granularity and biological relevance.

Quick start

Follow the repository instructions for this skill and your agent. Review the files and dependencies before adding it to your workflow.

Guides ↗

Examples

Read the usage examples in the source repository.

View source ↗

Source history

Indexed on
2026-01-21
Index updated
2026-01-23
Branch
main

Index and sync dates describe this directory. View the source repository for code history.

GitHub ↗

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