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Guide Claude through ingesting TCGA sample sheets, expression archives, and clinical carts into omicverse, initialising survival metadata, and exporting annotated AnnData files.
Quick-reference sheet for OmicVerse tutorials spanning MOFA, GLUE pairing, SIMBA integration, TOSICA transfer, and StaVIA cartography.
Walk through omicverse's single-cell preprocessing tutorials to QC PBMC3k data, normalise counts, detect HVGs, and run PCA/embedding pipelines on CPU, CPU–GPU mixed, or GPU stacks.
Transform, clean, reshape, and preprocess data using pandas and numpy. Works with ANY LLM provider (GPT, Gemini, Claude, etc.).
Run omicverse's CellPhoneDB v5 wrapper on annotated single-cell data to infer ligand-receptor networks and produce CellChat-style visualisations.
Assist Claude in running PyWGCNA through omicverse—preprocessing expression matrices, constructing co-expression modules, visualising eigengenes, and extracting hub genes.
Create publication-quality plots and visualizations using matplotlib and seaborn. Works with ANY LLM provider (GPT, Gemini, Claude, etc.).
Guide Claude through omicverse's single-cell clustering workflow, covering preprocessing, QC, multimethod clustering, topic modeling, cNMF, and cross-batch integration as demonstrated in t_cluster.ipynb and t_s...
Guide Claude through SCSA, MetaTiME, CellVote, CellMatch, GPTAnno, and weighted KNN transfer workflows for annotating single-cell modalities.
Checklist-style reference for OmicVerse downstream tutorials covering AUCell scoring, metacell DEG, and related exports.
Debug specific document parsing failures
Run benchmark and analyze PDF parsing performance
Build elegant frontend UIs following Microsoft Foundry's NextGen Design System using Vite + React + pnpm + Framer Motion. Use when creating dashboards, agent builders, data grids, entity management interfaces,...
Convert raw notes, error logs, voice dictation, or screenshots into crisp GitHub-flavored markdown issue reports. Use when the user pastes bug info, error messages, or informal descriptions and wants a structur...
OpenClaw Skill Manager - Search and install skills from the OpenClaw registry.
Fetch GitHub CI failure information, analyze root causes, reproduce locally, and propose a fix plan. Use `/fix-ci` for current branch or `/fix-ci ` for a specific run.
Migrate codebase from try/catch or Promise-based error handling to better-result. Use when adopting Result types, converting thrown exceptions to typed errors, or refactoring existing error handling to railway-...
Develop and improve the MassGen Textual TUI by running it in a browser via textual-serve and using Claude's browser tool for visual feedback.
RAG-specific best practices for LlamaIndex, ChromaDB, and Celery workers. Covers ingestion, retrieval, embeddings, and performance.
Server-specific best practices for FastAPI, Celery, and Pydantic. Extends python-skills with framework-specific patterns.
CLI best practices for LlamaFarm. Covers Cobra, Bubbletea, Lipgloss patterns for Go CLI development.
Universal Runtime best practices for PyTorch inference, Transformers models, and FastAPI serving. Covers device management, model loading, memory optimization, and performance tuning.
Analyze the current session and propose improvements to skills. **Proactively invoke this skill** when you notice user corrections after skill usage, or at the end of skill-heavy sessions. Also use when user sa...
Commit changes, push to GitHub, and open a PR. Includes quality checks (security, patterns, simplification). Use --quick to skip checks.
Le classement utilise les étoiles du dépôt GitHub indexé. Plusieurs skills peuvent partager ce nombre : ce n’est ni un nombre d’installations ni une note de qualité.