GitHub
pipeline-tracker
Global drug development pipeline tracking by disease, target, mechanism, or company. Use for competitive intelligence, opportunity identification, and trend analysis. Keywords: pipeline, drug development, clin...
Skills IA documentation scientific computing
Découvrez les skills documentation scientific computing, comparez leurs dépôts et consultez leurs instructions.
Catégories: documentation scientific computing
documentation scientific computing Effacer les filtres
Explorer
GitHub
target-profile
Generate comprehensive target profiles including druggability assessment, disease associations, pathway context, and competitive landscape. Use this skill when analyzing drug targets for validation, dossier cr...
GitHub
compound-profile
Generate comprehensive compound profiles including structure, properties, bioactivity, and development status. Use for drug analysis, SAR studies, and competitive profiling. Keywords: compound, drug, molecule,...
GitHub
report-generator
Generate professional drug discovery reports including target dossiers, competitive briefs, and Go/No-Go decision summaries. Use this skill when you need formatted reports for presentations, decision meetings,...
GitHub
writing-papers
Create interactive HTML artifacts for academic papers using parallel subagent processing. Includes comprehensive pre-submission review checklist for paper quality assurance.
GitHub
perplexity-researcher-pro
Complex research requiring deeper analysis, multi-step reasoning, and sophisticated source evaluation for technical, academic, or specialized domain queries needing expert-level analysis, high-stakes decisions,...
GitHub
research-workflow
Systematic research workflow orchestrating multi-source research operations for comprehensive domain investigation. Sequential workflow from web search through GitHub exploration and documentation analysis to r...
GitHub
multi-ai-research
Comprehensive research and analysis using Claude (subagents), Gemini CLI, and Codex CLI. Multi-perspective research with cross-verification, iterative refinement, and 100% citation coverage. Use for security an...
GitHub
deep-research
Deep research on technical topics using EXA tools with intelligent two-tier caching. Use when user asks to research a topic, investigate best practices, look up information, find patterns, or explore architectu...
GitHub
lifesciences-graph-builder
Orchestrates life sciences APIs to build knowledge graphs using the Fuzzy-to-Fact protocol, combining MCPs for nodes and curl for edges, then persisting to Graphiti. This skill should be used when the user asks...
GitHub
lifesciences-proteomics
Queries protein databases (UniProt, STRING, BioGRID) via curl for protein lookups, protein-protein interactions, functional enrichment analysis, and cross-database ID mapping. This skill should be used when the...
GitHub
lifesciences-clinical
Queries clinical databases (Open Targets, ClinicalTrials.gov) via curl for target-disease associations, target tractability assessment, and clinical trial discovery. This skill should be used when the user asks...
GitHub
lifesciences-genomics
Queries genomic databases (Ensembl, NCBI, HGNC) via curl for gene lookup, variant annotation, orthology, and cross-database ID resolution. This skill should be used when the user asks to "annotate variants", "f...
GitHub
lifesciences-pharmacology
Queries pharmacology databases (ChEMBL, PubChem, DrugBank, IUPHAR) via curl for drug mechanisms, target identification, bioactivity profiling, and indication discovery. This skill should be used when the user a...
GitHub
lifesciences-crispr
Validates synthetic lethality claims from CRISPR knockout screens using BioGRID ORCS 5-phase workflow. This skill should be used when the user asks to "validate synthetic lethality", "query CRISPR essentiality...
GitHub
paper-implementation
Implement research papers from arxiv. Use when the user provides an arxiv link, asks to implement a paper, or wants to reproduce research results.
GitHub
ctxresearcher
Efficiently research topics using parallel agents via Contextune's /ctx:research command. Use when users ask to research, investigate, find information about topics, compare options, or evaluate libraries/tools...
GitHub
pyopenms
Complete mass spectrometry analysis platform. Use for proteomics workflows feature detection, peptide identification, protein quantification, and complex LC-MS/MS pipelines. Supports extensive file formats and...
GitHub
benchling-integration
Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation.
GitHub
scanpy
Standard single-cell RNA-seq analysis pipeline. Use for QC, normalization, dimensionality reduction (PCA/UMAP/t-SNE), clustering, differential expression, and visualization. Best for exploratory scRNA-seq analy...
GitHub
chembl-database
Query ChEMBL bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactivity data (IC50, Ki), find inhibitors, perform SAR studies, for medicinal chemistry.
GitHub
ena-database
Access European Nucleotide Archive via API/FTP. Retrieve DNA/RNA sequences, raw reads (FASTQ), genome assemblies by accession, for genomics and bioinformatics pipelines. Supports multiple formats.
GitHub
pdb-database
Access RCSB PDB for 3D protein/nucleic acid structures. Search by text/sequence/structure, download coordinates (PDB/mmCIF), retrieve metadata, for structural biology and drug discovery.
GitHub
brenda-database
Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway an...
Le classement utilise les étoiles du dépôt GitHub indexé. Plusieurs skills peuvent partager ce nombre : ce n’est ni un nombre d’installations ni une note de qualité.