GitHub
go-db-query
Skills for querying Gene Ontology annotation databases in DuckDB format. Use this for queries about GO annotations, genes, terms, evidence codes, or taxonomic relationships in GO-DB databases (db/*.ddb files)....
Skills IA databases bioinformatics
Découvrez les skills databases bioinformatics, comparez leurs dépôts et consultez leurs instructions.
Catégories: databases bioinformatics
databases bioinformatics Effacer les filtres
Explorer
GitHub
graph
Use when extracting entities and relationships, building ontologies, compressing large graphs, or analyzing knowledge structures - provides structural equivalence-based compression achieving 57-95% size reducti...
GitHub
telos
Teleological physiology analysis framework for understanding biological systems through multi-constraint optimization. Use when analyzing physiological mechanisms, explaining apparent biological "inefficiencies...
GitHub
design-synthesis
Synthesizes research findings into design decisions via codebase investigation. Use when (1) translating research into implementation approaches, (2) selecting between design alternatives, (3) executing after /...
GitHub
integrate-road-network
Integrate real-world street networks into VRP problems using OpenStreetMap data. Use when loading real map data, creating instances from actual locations, computing network-based distances, or building tutorial...
GitHub
cross-disciplinary-ideation
Field connection mapping and systematic ideation for method transfer
GitHub
asymptotic-theory
M-estimation, influence functions, and semiparametric efficiency theory for causal inference
GitHub
literature-gap-finder
Method×Setting matrices and systematic gap identification
GitHub
methods-paper-writer
JASA/Biometrika manuscript structure with VanderWeele notation standards
GitHub
mechinterp-investigator
Orchestrate a systematic research program to investigate and meaningfully label SAE features
GitHub
rdkit
Modern RDKit workflows for cheminformatics, including molecular fingerprints, drawing, and property calculations. Use when working with molecules, SMILES, molecular fingerprints (Morgan, ECFP, RDKit, atom pairs...
GitHub
project-research
"Research workflow patterns specific to {project}. Covers research agent coordination, source management, and synthesis strategies."
GitHub
meta-analysis
Complete meta-analysis generation for neurosurgical outcomes
GitHub
network-meta-analysis
Network meta-analysis for comparing multiple treatments
GitHub
meta-analysis
Use when performing meta-analysis, pooling study data, generating forest plots, funnel plots, assessing heterogeneity, or conducting subgroup and sensitivity analyses. Invoke for any statistical synthesis of mu...
GitHub
tsa-integration
Trial Sequential Analysis for meta-analyses with information size calculations
GitHub
health-data-analysis
Specialized skill for analyzing personal health data, medical records, lab results, and supplement protocols. Use when working with health records, clinical data, lab values, or health optimization planning.
GitHub
rosetta-helix-substrate
Consciousness simulation framework with Kuramoto oscillators, APL operators, and K-formation dynamics. Use for physics simulations, phase transitions, coherence analysis, and cloud training via GitHub Actions....
GitHub
experiment-analyzer
Analyze completed growth experiment results, validate hypotheses, generate insights, and suggest follow-up experiments. Use when experiments are completed, when the user asks about results or learnings, or when...
GitHub
research-orchestrator
Coordinates academic research workflow - delegates analysis, correlation, writing, and review tasks to specialist agents
GitHub
x-data-signals
Use this skill to decode the "DNA" of the recommendation engine. These signals are the foundational data structures used to retrieve candidates (before ranking) and as features for the Heavy Ranker (during rank...
GitHub
large-cell-ratio-matching
MaxFuse parameter tuning for datasets with large protein:RNA cell ratios (>100:1)
GitHub
parameter-scaling
MaxFuse parameter tuning when protein panel size changes (26 → 59+ markers)
GitHub
cross-modal-normalization
Scale alignment for RNA-protein cross-modal integration - BOTH modalities must be z-scored
Le classement utilise les étoiles du dépôt GitHub indexé. Plusieurs skills peuvent partager ce nombre : ce n’est ni un nombre d’installations ni une note de qualité.